Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787722.1_cds_XP_016510844.1_229
CDS Infomation

[gene=LOC107828075] [db_xref=GeneID:107828075] [protein=inositol phosphorylceramide glucuronosyltransferase 1-like] [protein_id=XP_016510844.1] [location=complement(join(13227..13368,15449..15572,15663..15930,16205..16309,16388..16525,16674..16781,18078..18241,18438..18623,19286..19406,20647..20883))] [gbkey=CDS]
Sequence

ATGAAAGTCAGTCTTTCAAGATTAGGGGTTCTTTTATTTTTGATTTTTATGTTATGTGAT
TGTTTTATTGGAGCTTCTTGTAAATCTGAGGAAGCATATGTGACCCTTTTGTATGGAGAT
GAATTCTTGCTTGGAGTTAGGGTTCTTGGAAAGTCAATTAGGGATACTGGATCCACTAAA
GATATGGTTGTTTTGGTCTCTGATGGTGTTTCTCAATATGCTAAAGAGCTCCTCTTGGCA
GATGGTTGGATTGTGGAGAAAATTAGTTTACTGGCAAACCCAAATCAAGTGAGGCCGAAG
AGGTTTTGGGGCGTCTATACAAAGCTAAAAGTATTTAACATGACCAGTTACAAGAAAGTG
GTGTATCTTGATGCTGATACCATTGTTGTTAAAAGCATTGAAGATCTGTTTAAATGTGGA
AAGTTCTGTGCAAATTTAAAACATTCTGAGAGACTGAATTCTGGAGTCATGGTGATTGAG
CCATCGGAAAAAGTTTTTAATGATATGATGAGCAAGGTGACCACTTTGCCTTCTTACACC
GGAGGTGATCAAGGTTTTCTCAACTCCTACTATGTTGGGTTTGCTAATGCTCATGTTTAC
GAGCCAAATTTGTCTTCAGATGTCTTAAATTCTAGAAAGGTTCCTGAAATGGAGAGACTT
TCTACTCTTTACAATGCAGATGTTGGCCTCTACATGCTTGCTAACAAGTGGATGGTGGAT
GAAAAGGAACTCCGAGTTATTCATTACACACTTGGCCCGCTTAAACCGTGGGATTGGTGG
ACTTCTTGGCTGTTAAAACCTGTTGATGTGTGGCAGAATGTGAGGGTACAACTTCAAGAA
TCTCTACCTGGAACTGGTGGGGGCAAAAATTCCAGAGATGAACTTCTTGTCAAATTTCTT
TATTTGCTTCCGTTAGTTCTGATAGCATTTTGTTACTATCGGTCTTTCCTACAGACACAA
TCACGATGGCTTCATATCCGACAACTGTACTACAAGGTCAGAGGAGGTGCCCTAGCTTAC
GCCTCTGTTCCGCCAGCTTCCATCAGCTCCAACCAGCCGGTGAAGGTGCCTGCTTTTCTG
GGTGCGATATCTGTCTGTTGCTGTTTTGCTGCTGCGCTGGTGTCCCTTGGCCTTCCACTT
CTAATCATTCCACGCCAAGTAATGCCATGGATCGGTCTCCTCTTAATGTATGAGTGGACA
TTTACACTTTTCTTCCTCTTGTTTGGAAGTTATTTGCACTTAGTGTATCAGTGGGGAAGG
GTTGCGGTAAATCAATCTGGACAATTTCTGGCTCATCCTGTATCTTTGGATTATGAACCT
GGAAAAGGTCATCAGCGGCAGCAATCATGTTGTGACATTGCAGCGTGGTACTATGGGTTA
GGGATGGCATTTCTTGCCATTGCAGCCCCTGCATTGCCTGGTATTTTTGGAGTCACTTCT
TTATTTTTGAGGTTAGGTTTGATGGTGGCAGGTGGTCTTATTTTGGCATCCTTCACGACA
TATGCTTCCGAGCATCTATCGATTAGATCATTCGTTAGAGGCTATGAAGAAAGGAACACA
CCAAAGAATAGGAGTGTATGTTTCTTATGCTGA

Peptide Sequence

PEP ID

XP_016510844.1
PEP Infomation

PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1-like [Nicotiana tabacum]
Sequence

MKVSLSRLGVLLFLIFMLCDCFIGASCKSEEAYVTLLYGDEFLLGVRVLGKSIRDTGSTK
DMVVLVSDGVSQYAKELLLADGWIVEKISLLANPNQVRPKRFWGVYTKLKVFNMTSYKKV
VYLDADTIVVKSIEDLFKCGKFCANLKHSERLNSGVMVIEPSEKVFNDMMSKVTTLPSYT
GGDQGFLNSYYVGFANAHVYEPNLSSDVLNSRKVPEMERLSTLYNADVGLYMLANKWMVD
EKELRVIHYTLGPLKPWDWWTSWLLKPVDVWQNVRVQLQESLPGTGGGKNSRDELLVKFL
YLLPLVLIAFCYYRSFLQTQSRWLHIRQLYYKVRGGALAYASVPPASISSNQPVKVPAFL
GAISVCCCFAAALVSLGLPLLIIPRQVMPWIGLLLMYEWTFTLFFLLFGSYLHLVYQWGR
VAVNQSGQFLAHPVSLDYEPGKGHQRQQSCCDIAAWYYGLGMAFLAIAAPALPGIFGVTS
LFLRLGLMVAGGLILASFTTYASEHLSIRSFVRGYEERNTPKNRSVCFLC

Transcript Sequence

Gene sequence data has not been registered.